Post-doctorat en modélisation et dynamique

Type de poste
Niveau d'étude minimal
Dates
Durée du poste
Contrat renouvelable
Contrat non renouvelable
Date de prise de fonction
Date de fin de validité de l'annonce
Localisation
Adresse

Université d'Orléans - Pôle de chimie
rue de Chartres - BP 6759
45067 Orléans Cedex 2
France

Contacts
Pascal Bonnet
Samia Aci-Sèche
Email du/des contacts
pascal.bonnet@univ-orleans.fr
samia.aci-seche@univ-orleans.fr
Description

A post-doctoral position is open in the Structural Bioinformatic & Chemoinformatic team (SB&C) at the ICOA lab in Orléans.

Subject
In the early stage of the drug discovery process, the selection of ligand is mainly based on experimental values that reflect the compound affinity (IC50, Kd, …). Recently, it appeared that considering other criteria, and particularly binding kinetics parameters may be of great interest to limit the high failure rate of compounds during clinical trials.
In the search of relevant in silico tools for drug design, a research axis of the SB&C team is dedicated to the development of new methodologies to predict the binding kinetics of ligands.
Two protocols, based on biased molecular dynamics simulations, have been yet developed to carry out the unbinding process of protein kinase inhibitors and to predict the associated residence time from these simulated pathways. We aim to pursues these developments, notably to work out the prediction of the ligand entry pathway and the corresponding parameters.

Profile requirements
• PhD in bioinformatics or chemoinformatics
• Good skills in molecular modeling and structural bioinformatics
• Deep knowledge in molecular dynamics simulations (unbiased, biased, …)
• Proficiency with at least one programming language (Python preferably)
• Computational background to easily adapt to a Linux environment

Please send a CV and the name of two references to pascal.bonnet@univ-orleans.fr and samia.aci-seche@univ-orleans.fr

Equipe adhérente personne morale SFBI
Equipe Non adhérente