Génomique Végétale

URGI

Acronyme ou nom de la structure
Nom complet (en toutes lettres)
Unité de recherche en Génomique-Info
Adresse

Unité de Recherches en Génomique-Info (UR INRA 1164),
INRA, Centre de recherche de Versailles, bat.18
RD10, Route de Saint Cyr

78026 Versailles Cedex, FRANCE
France

Téléphone
+33 1 30 83 30 00
Description (English)

URGI - Unité de Recherche Génomique Info - is a research unit in genomics and bioinformatics at Institut National de la Recherche Agronomique (INRA), dedicated to plants and crop parasites. The URGI research activity covers data integration as well as genome structure and dynamics. URGI hosts a bioinformatics platform which belongs to the Institut Français de Bioinformatique, the French node of Elixir, the European network of bioinformatics platforms.

SFBI
Membre de la SFBI

GDEC

Acronyme ou nom de la structure
Nom complet (en toutes lettres)
Génétique, Diversité et Ecophysiologie des Céréales
Adresse

France

Téléphone
+33 (0)4 73 62 43 21
Fax
+33 (0)4 73 62 44 53
Description (English)

GDEC Team involved in Bioinformatics

English keywords
Genetic & physical & transcriptomic mapping,positional clonage,genetic recombination,genome sequencing,structural and functional annotation,workflow TriAnnot, wheat, Triticum aestivum
SFBI
Membre de la SFBI

Gnet - IPS2

Acronyme ou nom de la structure
Nom complet (en toutes lettres)
Genomics Networks
Adresse

Equipe Genomic Networks (Gnet)
Paris-Saclay Institute of Plant Sciences (IPS2)
Bâtiment 630, rue de Noetzlin
Plateau du Moulon

91190 - Gif-sur-Yvette

France

Description (English)

The Genomic Networks group develops different Bioinformatic and Biostatistic approaches to infer the biological function of A. thaliana genes and transcriptional regulatory elements. We developped mainly 2 databases (FLAGdb++, CATdb) supporting the IPS2 Transcriptomic platform and projects. These databases are useful for comparative plant genomics and transfer of knowledge from model plant genomes to plants of agronomical interest. Using this tool, we study, in a multidisciplinary project, the transcriptional re-programming that occurs in the A. thaliana response to biotic and abiotic stresses in order to identify novel gene targets and establish networks in the perspective of biotechnological applications or genetic selection for plant stress resistance.

English keywords
Plant Genomics, Transcriptomic, Databases, Sequence annotation, regulatory networks
SFBI
Membre de la SFBI