Post-doc / IR

Notation and ranking of subgraphs extracted from biological knowledge graphs

The post-doctoral project concerns the analysis of complex interaction networks. The main ressource at our disposal is a huge heterogeneous graph database (provided by EdgeLeap for the FIGHT-HF program) that represents various types of interactions between various groups of elements : proteins, diseases, drugs, etc. One objective of the FIGHT-HF project is to exploit this ressource to identify new biomarkers characteristics of certain heart-failure mechanisms.

Post-doctoral fellow in method development for Structural Variation detection

A 2-year post-doctoral fellowship is available at the Inria Genscale team in Rennes (France) to work on the development of novel computational methods for the detection and analysis of structural variations with linked-read sequencing data with Dr Claire Lemaitre and colleagues (http://people.rennes.inria.fr/Claire.Lemaitre/).

Computational pathology

The possibility of combining imaging modalities with gene and protein-level data opens new avenues for the development of novel biomarkers or for the identification of image-based surrogate biomarkers for gene/protein signatures. The current methods in computational pathology are, however, still under-developed for fully exploring this domain. We are looking for a strong postdoctoral candidate with proven research record in biomedical imaging – preferably pathology image analysis – to develop new approaches to computational pathology.

NGS data analysis

We are looking for a bioinformatician with experience in the analysis of various NGS data from pre-processing to statistical analysis and data mining. The position is open within the international collaborative H2020 project Oncobiome, with the main aim to identify multiomics signatures associated with cancer incidence and progression.

Mass spectrometry data analysis

For the analysis of GC/LC-MS targeted and untargeted data, we are looking for an experienced researcher able to take the lead of a small group and establish a research program in close collaboration with the experimental laboratories of RECETOX.
Profile:
- A Ph.D. in the field of data analysis (bioinformatics, statistics, computational biology and related).
- The candidate must have a strong background in signal processing with a proven track record in the development of methods for mass spectrometry data analysis.

Computational and statistical genomics

A Postdoctoral position is open in the Integrative genomics for neurodevelopment group at NeuroDiderot. We propose to carry out advanced systems genetics approaches to identify genetic drivers and new therapeutical options for epilepsy. This is to follow up on the paper in Genome Biology (Delahaye-Duriez et al. 2016, https://doi.org/10.1186/s13059-016-1097-7). The project is funded by ANR (https://anr.fr/Project-ANR-18-CE17-0009).
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