Bioinformatic Software Developer

 CDD · Ingénieur autre  · 36 mois (renouvelable)    Bac+5 / Master   EMBL's European Bioinformatic Institute (EBI) · Hinxton (Royaume-Uni)  Depending on profile (£2809 -> £3143) + Benefits


EMBL/EBI Software Engineer Ensembl


We are looking for a highly motivated Python Software developer to join the Ensembl Production Team. Come and help us design and implement the future of Ensembl data processing at the European Bioinformatics Institute (EMBL-EBI), which is located on the Wellcome Trust Campus near Cambridge in the UK.

The Software Developer will focus on developing software used for the production of data releases for Ensembl, as part of the Ensembl Production Team. The team is responsible for:

  • Coordination of the production of new releases of Ensembl datasets across multiple platforms. 
  • Developing new automated pipelines for use in the production processes
  • Designing and implementing software infrastructure for data processing and automated delivery
  • Integrating automated CI/CD pipelines for our services platforms
  • Providing production services to other Ensembl / Ensembl Genomes teams
  • Ensuring the quality and integrity of data for releases

We are a dynamic and international team with lots of opportunities to meet likeminded individuals working towards tackling some of the biggest challenges facing our planet including food security and improving human health.

Your role

As a software developer your day-to-day duties will include:

  • Design and implementation of software components for automated processing using messaging queues and micro-services architecture
  • Design and implementation of new production pipelines - Python and sometimes Perl
  • Participating in coordination of Ensembl and Ensembl Genomes releases, including collaboration with other members of the Ensembl and Ensembl Genomes teams
  • Production pipeline execution and monitoring

If this sounds like a role you want to do, then we cannot wait to receive your application.


Procédure : Apply via associated link

Date limite : 8 juin 2022


Marc Chakiachvili

Offre publiée le 12 mai 2022, affichage jusqu'au 8 juin 2022