CDD · IE  · 36 mois (renouvelable)    Bac+5 / Master   Institut Cochin · Paris (France)  46600 à 67900

 Date de prise de poste : 1 juin 2023


single cell RNA sequencing spatial transcriptome cancer immunology


We are looking for a highly motivated engineer for the lab of Julie Helft (Institut Cochin, Paris) who was recently awarded an ERC grant funding for 5 years.

The project include the analysis of single cell RNA sequencing and of spatial transcriptomic data generated from human and mouse tumors. The datasets will be generated by the lab and will also include publicly available datasets

The bio-informatician will be an author on the publication steming from the wet-lab

For more information please consult this publication from the lab: 

Nalio Ramos R, Missolo-Koussou Y, Gerber-Ferder Y, Bromley CP, Bugatti M, Núñez NG, Tosello Boari J, Richer W, Menger L, Denizeau J, Sedlik C, Caudana P, Kotsias F, Niborski LL, Viel S, Bohec M, Lameiras S, Baulande S, Lesage L, Nicolas A, Meseure D, Vincent-Salomon A, Reyal F, Dutertre CA, Ginhoux F, Vimeux L, Donnadieu E, Buttard B, Galon J, Zelenay S, Vermi W, Guermonprez P, Piaggio E, Helft J. Tissue-resident FOLR2+ macrophages associate with CD8+ T cell infiltration in human breast cancer. Cell. 2022 Mar 31;185(7):1189-1207.e25. doi: 10.1016/j.cell.2022.02.021. Epub 2022 Mar 23. PMID: 35325594.

Required skills: 

  • Master in Data science, Computer Science, Computational Biology, or related fields.  
  • Previous experience in single-cell data analysis and/or multi-omics integration tools.  
  • Strong programming (R and Python) skills will be a plus. 
  • Previous experience in collaborations with wet-lab biologists will be a plus.

How to apply:

Send a CV and letter to



Procédure : Envoyer votre CV et lettre de motivation à

Date limite : 19 mai 2023


Julie Helft

Offre publiée le 7 mars 2023, affichage jusqu'au 19 mai 2023